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MakerBot Print is our newest print-prepration software, which supports native CAD files and STL assemblies,
allows you to interact with all your printers via the Cloud, and many other exciting new features.

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Resizing the single parts in Cura just before printing works fine for me (see my make).
Resized the main parts to 50% and the small "inlay" parts (eyes and dots) to 48% for a better fit.