MakerBot Print is our newest print-prepration software, which supports native CAD files and STL assemblies,
allows you to interact with all your printers via the Cloud, and many other exciting new features.

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You should be able to scale this up and down quite readily. It's made to suit a wide array of containers thanks to the wide top compared to the narrow base / outlet. I design in Rhino so you would need to have Rhino for the original files to be of any use.