MakerBot Print is our newest print-prepration software, which supports native CAD files and STL assemblies,
allows you to interact with all your printers via the Cloud, and many other exciting new features.
Those should most definitely work. I'm doing another mini quad build right now using these:
It's the smallest they have at the moment but I believe they're going to get some 10A soon. Just wanted to put it out there in case you needed another source. Let us know how it goes!