MakerBot Print is our newest print-prepration software, which supports native CAD files and STL assemblies,
allows you to interact with all your printers via the Cloud, and many other exciting new features.

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There's a quickndirty fix for that too though, if you use CURA, look up Mesh fixes in the settings and change them from 0.05 to something higher, I have mine on 0.5. It'll give less instructions to the printer, which will then not be clogged and create bubbles by waiting a short time.