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Very cool project. Of course you could laser-cut the entire thing as well. Holes in a plate and some square holes to fit the walls into. If you make it from wood and walls from semi-transparent it would look very cool. Or white (milky) acrylic at the bottom and shine RGB-led light onto it from the bottom. You could really pimp this thing :)
Plus, you could add magnets and stuff to make it interactive (incorporate pinball ideas)

I so wish I had more time :)