MakerBot Print is our newest print-prepration software, which supports native CAD files and STL assemblies,
allows you to interact with all your printers via the Cloud, and many other exciting new features.

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I don't use OpenScad, but of the CAD/3D design programs I have tried (maybe a half dozen), the SETP files have worked. You can also try 123Design by Autodesk which can import STP. If you need it in a different format let me know and I can see if I can export it.