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MakerBot Print is our newest print-prepration software, which supports native CAD files and STL assemblies,
allows you to interact with all your printers via the Cloud, and many other exciting new features.

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I'm sorry, I just saw the notifications for your messages. I'm glad you got them working. I use NC. I have extra endstop ports on my board so that when the filament runs out it registers as the endstop being triggered. From there, a quick change in marlin to target that endstop and everything works perfectly.