MakerBot Print is our newest print-prepration software, which supports native CAD files and STL assemblies,
allows you to interact with all your printers via the Cloud, and many other exciting new features.

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Also took me a while to realize it.

BTW: I purchased endstops to install a Z-Max on both motors. Then I found they weren't necessary either. To sync the Z motors I just disable software endstops and then run both motors 2 mm lower than they can go. It might not be elegant but it's easy and works.