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MakerBot Print is our newest print-prepration software, which supports native CAD files and STL assemblies,
allows you to interact with all your printers via the Cloud, and many other exciting new features.

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The fact that the HDD and the PSU are sitting on the PCI Express connectors makes it hard to implement a GPU.
But if you want an GPU I just uploaded a new PC mount this time for a larger ATX Mainboard. This time I added a bit of space for a small GPU.
https://www.thingiverse.com/thing:3115625

Minimalistic ATX PC build with GPU mount