MakerBot Print is our newest print-prepration software, which supports native CAD files and STL assemblies,
allows you to interact with all your printers via the Cloud, and many other exciting new features.
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when I run my new uploads in customizer. Customizer will run already uploaded custom .scad files just fine. To make sure my .scad files weren't the issue I re-uploaded one of my working customizer files. The old version ran under the customizer and the new version gave me the "We're sorry, but something went wrong" message. Finally, I uploaded the Customizer sample program and it too gave the "We're sorry, but something went wrong" message.
You can try it yourself...https://www.thingiverse.com/apps/customizer/run?thing_id=2554175