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MakerBot Print is our newest print-prepration software, which supports native CAD files and STL assemblies,
allows you to interact with all your printers via the Cloud, and many other exciting new features.

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If you are using a printer that has a moving build plate in one axis, I'd rotate the print 90 degrees to prevent the wobble. Another option is printing it with a much larger brim or raft. If that doesn't work supports will help keep it upright. Hope that works!