MakerBot Print is our newest print-prepration software, which supports native CAD files and STL assemblies,
allows you to interact with all your printers via the Cloud, and many other exciting new features.
Just look up bowden 3d printer setups, im sure you can find a similar Prusa/ Reprap setup that is running a bowden. Hopefully the user who posted this answers us both, but im sure he/she is busy. i hope i helped you out!